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Table 1 Conserved Domain Database [18] sequence search for the α- and β-subunits of the F-type ATP synthase of E.coli and the B- and A- subunits of the A-type ATP synthase of Methanosarcina mazei

From: COGcollator: a web server for analysis of distant relationships between homologous protein families

Query Profile in CDD database
Flagellum-specific/type III secretory pathway ATPase V/A-type ATPase, non-catalytic B-subunit V/A-type ATPase, catalytic A-subunit F-type ATP synthase, non-catalytic α-subunit F-type ATP synthase, catalytic β-subunit
cd01136 cd01135 cd01134 cd01132 cd01133
ATPA_ECOLI 1.27∙10 −54 2.13∙10−38 1.34∙10−18 0.0 5.45∙10−25
ATPB_ECOLI 7.82∙10 −68 2.13∙10−32 6.69∙10−25 2.11∙10−24 0.0
VATB_METMA 2.08∙10 −51 0.0 3.58∙10−13 9.74∙10−28 8.29∙10−23
VATA_METMA 2.96∙10 −45 3.76∙10−27 0.0 1.34∙10−22 4.10∙10−28
  1. The smallest non-zero e-value for each query is given in bold numbers