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Table 1 Non-ribosomal proteins that retained LDRs in at least three minimal organisms of at least two different bacterial clades

From: Essential functions linked with structural disorder in organisms of minimal genome

Taxon ID

Clade

Species

rpoB

rpoC

rpoD

infB

prfA

groL

dnaK

ssb

ftsH

1053648 (115)

BPB

Cand. Tremblaya princeps PCVAL

ND

Ø

Ø

Ø

Ø

1343077 (137)

BPB

Cand. Nasuia deltocephalinicola str. NAS-ALF

ND

ND

ND

Ø

ND

ND

Ø

573234 (169)

APB

Hodgkinia cicadicola (strain Dsem)

ND

ND

ND

ND

ND

ND

Ø

Ø

1266371 (175)

BPB

Cand. Tremblaya phenacola PAVE

ND

ND

ND

ND

Ø

667013 (206)

GPB

Cand. Carsonella ruddii DC

ND

ND

ND

ND

ND

ND

ND

Ø

Ø

871271 (206)

BPB

Zinderia insecticola (strain CARI)

ND

ND

ND

ND

ND

ND

ND

Ø

1415657 (243)

BAC

endosymbiont of Llaveia axin axin

ND

ND

ND

ND

ND

Ø

1206109 (273)

GPB

Cand. Portiera aleyrodidarum BT-B-HRs

ND

ND

ND

ND

Ø

ND

482235 (448)

FIR

Phytoplasma mali (strain AT)

ND

ND

ND

ND

ND

ND

ND

347256 (529)

TEN

Mycoplasma hominis (strain ATCC 23114)

ND

ND

Ø

515618 (540)

GPB

Riesia pediculicola (strain USDA)

ND

ND

ND

ND

ND

107806 (572)

GPB

Buchnera aphidicola subsp. A. pisum (strain APS)

ND

ND

1318617 (572)

TEN

Cand. Mycoplasma girerdii

ND

ND

ND

ND

Ø

83333 (4306)

GPB

Escherichia coli strain K12

ND

ND

ND

435590 (3982)

BAC

Bacteroides vulgatus strain ATCC 8482

ND

ND

ND

ND

ND

224308 (4197)

FIR

Bacillus subtilis strain 168

ND

ND

  1. Taxon ID: the taxon identifier of the organisms with the number of their proteins annotated by UniProt in brackets. Clade: an abbreviation of the corresponding phylogenetic clade (APB Alphaproteobacteria, BPB Betaproteobacteria, GPB Gammaproteobacteria, BAC Bacteroidetes, FIR Firmicutes, TEN Tenericutes). Species and strain information is followed by columns showing information on the 9 proteins with retained LDRs. Different marks mean that i) the given protein was not annotated in the given organism (missing or does not show recognizable sequence homology (Ø)); ii) the protein is not disordered (ND), meaning that the given protein was annotated, but it does not contain an LDR in the given species, and iii) the protein has at least one LDR (). Data for non-minimal reference bacteria of three different clades are indicated in the last three lines in bold. A similar table with all corresponding UniProt identifiers indicated in the appropriate cells is available as Additional file 1: Table S2