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Table 1 Non-ribosomal proteins that retained LDRs in at least three minimal organisms of at least two different bacterial clades

From: Essential functions linked with structural disorder in organisms of minimal genome

Taxon ID Clade Species rpoB rpoC rpoD infB prfA groL dnaK ssb ftsH
1053648 (115) BPB Cand. Tremblaya princeps PCVAL ND Ø Ø Ø Ø
1343077 (137) BPB Cand. Nasuia deltocephalinicola str. NAS-ALF ND ND ND Ø ND ND Ø
573234 (169) APB Hodgkinia cicadicola (strain Dsem) ND ND ND ND ND ND Ø Ø
1266371 (175) BPB Cand. Tremblaya phenacola PAVE ND ND ND ND Ø
667013 (206) GPB Cand. Carsonella ruddii DC ND ND ND ND ND ND ND Ø Ø
871271 (206) BPB Zinderia insecticola (strain CARI) ND ND ND ND ND ND ND Ø
1415657 (243) BAC endosymbiont of Llaveia axin axin ND ND ND ND ND Ø
1206109 (273) GPB Cand. Portiera aleyrodidarum BT-B-HRs ND ND ND ND Ø ND
482235 (448) FIR Phytoplasma mali (strain AT) ND ND ND ND ND ND ND
347256 (529) TEN Mycoplasma hominis (strain ATCC 23114) ND ND Ø
515618 (540) GPB Riesia pediculicola (strain USDA) ND ND ND ND ND
107806 (572) GPB Buchnera aphidicola subsp. A. pisum (strain APS) ND ND
1318617 (572) TEN Cand. Mycoplasma girerdii ND ND ND ND Ø
83333 (4306) GPB Escherichia coli strain K12 ND ND ND
435590 (3982) BAC Bacteroides vulgatus strain ATCC 8482 ND ND ND ND ND
224308 (4197) FIR Bacillus subtilis strain 168 ND ND
  1. Taxon ID: the taxon identifier of the organisms with the number of their proteins annotated by UniProt in brackets. Clade: an abbreviation of the corresponding phylogenetic clade (APB Alphaproteobacteria, BPB Betaproteobacteria, GPB Gammaproteobacteria, BAC Bacteroidetes, FIR Firmicutes, TEN Tenericutes). Species and strain information is followed by columns showing information on the 9 proteins with retained LDRs. Different marks mean that i) the given protein was not annotated in the given organism (missing or does not show recognizable sequence homology (Ø)); ii) the protein is not disordered (ND), meaning that the given protein was annotated, but it does not contain an LDR in the given species, and iii) the protein has at least one LDR (). Data for non-minimal reference bacteria of three different clades are indicated in the last three lines in bold. A similar table with all corresponding UniProt identifiers indicated in the appropriate cells is available as Additional file 1: Table S2