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Table 1 In silico prediction of antibiotic resistance genes in our consensus genome

From: Whole-genome assembly of Akkermansia muciniphila sequenced directly from human stool

Class Best match Length GC content Best hits with organism Similarity Coverage Accession number
(aa) (%) (%) (%)
Beta-Lactamases cfxA 332 51 Akkermansia muciniphila ATTCBAA-835 100 100 WP031930069
  tlaA 258 60 Akkermansia muciniphila ATTCBAA-835 97 84 YP001876808
  Beta-lactamase domain protein 298 60,7 Akkermansia muciniphila ATTCBAA-835 100 87 YP001877266
  CphA2 403 60,8 Akkermansia muciniphila ATTCBAA-835 99 95 YP297581
  Act 323 60,8 Akkermansia muciniphila ATTCBAA-835 99 85 YP001876732
  Metal-dependent hydrolases of the beta-lactamase superfamily 348 63,6 Akkermansia muciniphila ATTCBAA-835 99 75 YP001877492
  Metall o-beta-1actamase family protein 468 56,5 Akkermansia muciniphila ATTCBAA-835 99 100 YP001876862
  Zn-dependent hydro1ase 274 59,8 Akkermansia muciniphila ATTCBAA-835 96 98 YP001877763
Glycopeptides vanX; D-ala D-ala dipeptidase 234 56.6 Akkermansia muciniphila ATTCBAA-835 99 95 YP001878228
MLS mefA; macrolid efflux pump 401 49,2 Akkermansia muciniphila ATTCBAA-835 100 100 WP031931063
  ermB; erythromycin ribosome methy1ase 245 45 Akkermansia muciniphila ATTCBAA-835 100 100 WP012420167
  o1ec; macrolid ABC transporter protein 702 61,9 Akkermansia muciniphila ATTCBAA-835 65 100 WP012419164
Phenicol catA3; chloramphenica1 acetyltransferase 211 56 Akkermansia muciniphila ATTCBAA-835 99 100 YP001876953
Su1phonamide sulII; dihydropteroate synthase 279 65,7 Akkermansia muciniphila ATTCBAA-835 49 100 YP001877991
Tetracyclin tetO 639 51,2 Akkermansia muciniphila ATTCBAA-835 100 100 WP012419363
Trimethoprim dfrA3: dihydrofolate reductase 122 57,8 Akkermansia muciniphila ATTCBAA-835 99 75 YP001878622