Table 3 Preferred residue pairs (B*) for binding with RNA
From: Structure based approach for understanding organism specific recognition of protein-RNA complexes
B* | Probability (%) | ||||
|---|---|---|---|---|---|
E. coli | H. sapiens | S. cerevisiae | Thermophiles | Archaea | |
Arg-Gln | 75.0 | 0.0 | 50.0 | 0.0 | 100.0 |
Gln-Lys | 0.0 | 60.0 | 71.4 | 100.0 | 50.0 |
Arg-Ile | 0.0 | 100.0 | 33.3 | 0.0 | 83.3 |
Arg-Val | 100.0 | 100.0 | 42.9 | 41.7 | 0.0 |
Asn-Tyr | 0.0 | 100.0 | 100.0 | 0.0 | 75.0 |
Tyr-Val | 100.0 | 100.0 | 75.0 | 0.0 | 0.0 |
Ser-Asn | 0.0 | 100.0 | 28.6 | 75.0 | 0.0 |
Asp-Arg | 0.0 | 0.0 | 0.0 | 80.0 | 25.0 |
Gln-Ala | 0.0 | 0.0 | 0.0 | 100.0 | 75.0 |
Ser-Arg | 0.0 | 0.0 | 100.0 | 0.0 | 75.0 |
Val-Lys | 0.0 | 0.0 | 0.0 | 50.0 | 75.0 |
Arg-Arg | 28.6 | 0.0 | 0.0 | 25.0 | 100.0 |
His-Pro | 75.0 | 100.0 | 0.0 | 50.0 | 100.0 |