Figure 1
From: Bioinformatic flowchart and database to investigate the origins and diversity of Clan AA peptidases
Flowchart. This work is an attempt at investigating the diversity of the clan AA protein domain based on all its possible families. With this goal, we designed a flowchart of bioinformatic analyses to regularize and characterize the different phylogenetic signals. The flowchart consists of 4 steps: 1) Multiple alignments and consensus identification; 2) Information content enhancement; 3) HMMs and sequence logos; 4) Major consensus.