Table 15 Impact of the PV on the size of the index. N is the number of full-length mRNA sequences. R is the number of genomic index keys as a percentage of the number of distinct words on the unmasked genome.
From: Splign: algorithms for computing spliced alignments with identification of paralogs
| Â | Â | Human 36.3 | Mouse 37.1 |
|---|---|---|---|
mRNA | N | 214 749 | 240 299 |
| Â | R (%) | 8.4 | 10.2 |
EST | N | 7 732 838 | 4 836 245 |
| Â | R (%) | 38.6 | 27.2 |