A high-performance approach for predicting donor splice sites based on short window size and imbalanced large samples

Table 8 10-fold cross accuracy based on comparisons with the long-window size-based methods

Method	Window size (bp)	Ratio of positive-to-negative samples	SN (%)	SP (%)	(SN + SP)/2 (%)	Q⁹ (%)
MM1-H2MM	140	2796:27960 (1:10)	93.81	91.69	92.75	92.63
SVM-B	140	2796:27960 (1:10)	94.13	90.99	92.56	92.39
Meher’s method	102	2796:53124 (1:19)	88.30	89.40	88.90	88.80
χ²-DT	11	2796:271928 (1:97)	94.11	92.58	93.35	93.30

ISSN: 1745-6150