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Table 6 Model quality measured with MCC coefficient for the G-145 data set

From: Integration of multiple types of genetic markers for neuroblastoma may contribute to improved prediction of the overall survival

  OOB Cross-validation
FS metod Top 10 Top 20 Top 50 Top 100 Top 10 Top 20 Top 50 Top 100
Stage 1         
T-test 0.703 0.720 0.719 0.713     
IG-1D 0.788 0.784 0.801 0.796     
IG-2D 0.793 0.768 0.738 0.763     
T-test + lasso 0.790 0.834 0.862 0.861     
Stage 2         
T-test 0.683 0.709 0.714 0.704 0.692 0.719 0.716 0.712
IG-1D 0.732 0.767 0.766 0.762 0.741 0.782 0.778 0.774
IG-2D 0.729 0.733 0.743 0.759 0.743 0.753 0.756 0.771
T-test + lasso 0.792 0.827 0.848 0.848 0.802 0.840 0.865 0.867
Stage 3         
T-test 0.689 0.713 0.723 0.724 0.590 0.621 0.650 0.653
IG-1D 0.750 0.771 0.774 0.770 0.589 0.626 0.661 0.672
IG-2D 0.738 0.755 0.760 0.755 0.585 0.621 0.650 0.661
T-test + lasso 0.829 0.832 0.853 0.854 0.599 0.661 0.655 0.638