Biology Direct

Table 6 Model quality measured with MCC coefficient for the G-145 data set

From: Integration of multiple types of genetic markers for neuroblastoma may contribute to improved prediction of the overall survival

	OOB				Cross-validation
FS metod	Top 10	Top 20	Top 50	Top 100	Top 10	Top 20	Top 50	Top 100
Stage 1
T-test	0.703	0.720	0.719	0.713
IG-1D	0.788	0.784	0.801	0.796
IG-2D	0.793	0.768	0.738	0.763
T-test + lasso	0.790	0.834	0.862	0.861
Stage 2
T-test	0.683	0.709	0.714	0.704	0.692	0.719	0.716	0.712
IG-1D	0.732	0.767	0.766	0.762	0.741	0.782	0.778	0.774
IG-2D	0.729	0.733	0.743	0.759	0.743	0.753	0.756	0.771
T-test + lasso	0.792	0.827	0.848	0.848	0.802	0.840	0.865	0.867
Stage 3
T-test	0.689	0.713	0.723	0.724	0.590	0.621	0.650	0.653
IG-1D	0.750	0.771	0.774	0.770	0.589	0.626	0.661	0.672
IG-2D	0.738	0.755	0.760	0.755	0.585	0.621	0.650	0.661
T-test + lasso	0.829	0.832	0.853	0.854	0.599	0.661	0.655	0.638

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ISSN: 1745-6150

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