Biology Direct

Table 5 Model quality measured with MCC coefficient for the MA-145 data set

From: Integration of multiple types of genetic markers for neuroblastoma may contribute to improved prediction of the overall survival

	OOB				Cross-validation
FS metod	Top 10	Top 20	Top 50	Top 100	Top 10	Top 20	Top 50	Top 100
Stage 1
T-test	0.642	0.707	0.700	0.720
IG-1D	0.753	0.728	0.738	0.736
IG-2D	0.713	0.747	0.730	0.726
T-test + lasso	0.744	0.869	0.820	0.822
Stage 2
T-test	0.622	0.683	0.693	0.713	0.636	0.698	0.709	0.730
IG-1D	0.732	0.721	0.729	0.730	0.741	0.727	0.737	0.737
IG-2D	0.695	0.734	0.721	0.721	0.699	0.743	0.731	0.729
T-test + lasso	0.732	0.854	0.808	0.809	0.750	0.868	0.831	0.832
Stage 3
T-test	0.655	0.691	0.714	0.724	0.576	0.606	0.647	0.665
IG-1D	0.735	0.742	0.747	0.748	0.605	0.638	0.661	0.674
IG-2D	0.705	0.721	0.730	0.734	0.609	0.636	0.655	0.670
T-test + lasso	0.780	0.831	0.808	0.820	0.651	0.663	0.648	0.643

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ISSN: 1745-6150

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