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Table 5 Model quality measured with MCC coefficient for the MA-145 data set

From: Integration of multiple types of genetic markers for neuroblastoma may contribute to improved prediction of the overall survival

  OOB Cross-validation
FS metod Top 10 Top 20 Top 50 Top 100 Top 10 Top 20 Top 50 Top 100
Stage 1         
T-test 0.642 0.707 0.700 0.720     
IG-1D 0.753 0.728 0.738 0.736     
IG-2D 0.713 0.747 0.730 0.726     
T-test + lasso 0.744 0.869 0.820 0.822     
Stage 2         
T-test 0.622 0.683 0.693 0.713 0.636 0.698 0.709 0.730
IG-1D 0.732 0.721 0.729 0.730 0.741 0.727 0.737 0.737
IG-2D 0.695 0.734 0.721 0.721 0.699 0.743 0.731 0.729
T-test + lasso 0.732 0.854 0.808 0.809 0.750 0.868 0.831 0.832
Stage 3         
T-test 0.655 0.691 0.714 0.724 0.576 0.606 0.647 0.665
IG-1D 0.735 0.742 0.747 0.748 0.605 0.638 0.661 0.674
IG-2D 0.705 0.721 0.730 0.734 0.609 0.636 0.655 0.670
T-test + lasso 0.780 0.831 0.808 0.820 0.651 0.663 0.648 0.643