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Table 4 Gene prioritization results of CLIP-GENE at GSE47851 (Gata3 KO) data

From: CLIP-GENE: a web service of the condition specific context-laid integrative analysis for gene prioritization in mouse TF knockout experiments

  Context: Context: Context: Context:
Reported gene Immune regulation* Inflammatory response Cell differentiation Cell proliferation
Relb 144 56 117 209
Nfkb2 - - - -
Tnfrsf9 236 246 408 751
Tnfrsf21 - - - -
Icos 16 44 9 66
Cysltr1 186 282 392 638
Kit - - - -
Il1r2 - 203 - 483
Il13 4 37 44 125
Il5 5 50 52 149
Areg 71 87 154 96
Il1rl1 67 109 237 507
Ccr8 108 88 281 643
Tph1 216 180 86 222
Htr1b - - - -
Cd244 - - - -
Lta 19 5 122 203
Il10 8 4 47 74
Tnf 1 1 1 2
Nfkbia - 33 341 563
Cdkn2b 78 256 255 122
Lif - - - 402
Il2ra 84 206 88 546
Il9r 165 351 398 -
Il24 - 436 343 -
reproduced true positives/  
predicted candidates 16/260 19/536 18/613 18/896
  1. The table represents how CLIP-GENE succeed to reproduce and prioritize the reported genes from the data produced study [19]. Genes that are ranked in top 10 are marked with bold font while star (*) represents best performed context