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Table 3 Performance of CLIP-GENE while analyzing GSE53398 (Barx2 KO)

From: CLIP-GENE: a web service of the condition specific context-laid integrative analysis for gene prioritization in mouse TF knockout experiments

Methods

Precision

Recall

F-measure

DEG

0.0071

0.7872

0.0142

IA

0.0111

0.3617

0.0215

GeneFriends

0.0036

0.617

0.0071

CLIP-GENE (Myoblast progeny*)

0.1818

0.0426

0.069

CLIP-GENE (Muscle maintenance)

0.0476

0.0426

0.0449

CLIP-GENE (Chondrogensis)

0.1667

0.0426

0.0678

CLIP-GENE (Morphogenesis)

0.0217

0.4255

0.0412

  1. The best performed measurement is marked with a star (*) with a bold text