From: BLAST-based structural annotation of protein residues using Protein Data Bank
Sub-Database | Software used for assignment | Types of information in database | Number of protein chains | ||
---|---|---|---|---|---|
Unique | 70Â % | 40Â % | |||
SecStructure | DSSP | Regular secondary structure | 97216 | 30642 | 24211 |
Accessible surface area | |||||
BetaTurn | Promotif | Beta Turns and types | 90331 | 27763 | 21075 |
GammaTurn | Gamma turns | 72124 | 22971 | 16584 | |
BetaBulge | Beta bulges in proteins | 56186 | 17753 | 12944 | |
BetaHairpin | Beta hairpins | 72420 | 21623 | 15477 | |
PsiLoop | Psi loops | 13351 | 4382 | 3151 | |
DNAinteract | Â | DNA binding sites | 2123 | 849 | 757 |
RNAinteract | RNA binding sites | 1437 | 885 | 650 | |
LigandInt | LPC | Ligand interacting residues | 51615 | 17952 | 13525 |
MetalInt | Metal binding residues | 22629 | 9160 | 7286 |