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Table 1 List of atypical genomes showing HHPs’ average length, number of HHPs, ORFans' length, and the difference between the average length of HHP and ORFans for a given genome

From: The mysterious orphans of Mycoplasmataceae

 

Species

Average length of HHPs, aa

Number of HHPs

Average length of ORFans, aa

Number ORFans

Difference between the average length of HHP and ORFans, aa

1.

Ureaplasma urealyticum serovar 10 ATCC 33699 uid59011

366

416

472

230

−106

2.

Mycoplasma genitalium G37 uid57707

350

384

450

91

−100

3.

Mycoplasma hyopneumoniae 7448 uid58039

375

443

449

214

−74

4.

Anaplasma centrale Israel uid42155

349

691

417

232

−68

5.

Mycoplasma gallisepticum R low uid57993

368

489

429

274

−61

6.

Ureaplasma parvum serovar 3 ATCC 27815 uid58887

359

413

410

196

−51

7.

Chlorobium chlorochromatii CaD3 uid58375

367

1564

417

435

−50

8.

Anaplasma marginale Florida uid58577

353

699

395

241

−42

9.

Mycoplasma mobile 163 K uid58077

358

450

400

183

−42

10.

Mycoplasma hyorhinis HUB 1 uid51695

352

464

387

194

−35

11.

Mycoplasma hyopneumoniae 232 uid58205

375

437

410

254

−34

12.

Ureaplasma parvum serovar 3 ATCC 700970 uid57711

363

441

394

173

−30

13.

Anaplasma marginale Maries uid57629

352

699

382

249

−30

14.

Mycoplasma conjunctivae uid59325

360

420

387

272

−27

15.

Mycoplasma crocodyli MP145 uid47087

363

490

387

199

−24

16.

Mycoplasma hyopneumoniae J uid58059

391

471

413

186

−23

17.

Mycoplasma hominis ATCC 23114 uid41875

369

378

383

145

−14

18.

Lawsonia intracellularis PHE MN1 00 uid61575

492

51

500

53

−8

19.

Mycoplasma penetrans HF 2 uid57729

384

658

390

379

−5

20.

Burkholderia pseudomallei 1710b uid58391

377

2835

374

898

2

21.

Mycoplasma putrefaciens KS1 uid72481

358

474

351

176

7

22.

Mycoplasma agalactiae uid46679

366

522

354

291

11

23.

Rhodobacter sphaeroides 2 4 1 uid57653

332

82

318

21

13

24.

Methanobrevibacter ruminantium M1 uid45857

348

1513

335

704

14

25.

Nanoarchaeum equitans Kin4 M uid58009

286

356

269

184

16

26.

Mycoplasma synoviae 53 uid58061

363

479

345

180

17

27.

Mycoplasma mycoides capri LC 95010 uid66189

384

619

361

303

23

28.

Mycoplasma agalactiae PG2 uid61619

353

475

329

267

25

29.

Mycoplasma bovis PG45 uid60859

371

526

343

239

28

30.

Ehrlichia canis Jake uid58071

348

678

320

247

28

31.

Mycoplasma pulmonis UAB CTIP uid61569

379

560

350

222

30

32.

Mycoplasma pneumoniae M129 uid57709

367

445

334

203

32