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Table 1 General genome features

From: Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm

Species and Subspecies

Type strain

Status

Genome size (Mb)

GC content (%)

ORF

rRNA

tRNA

Genome accession no.

References

Klebsiella pneumoniae pneumoniae

HS11286

Complete

5.68

57.1

5,779

25

86

CP003200

Liu et al. (2012) [25]

Klebsiella pneumoniae pneumoniae

MGH 78578

Complete

5.69

57.2

5,184

25

85

CP000647

McClelland et al. (2006) [26]

Klebsiella pneumoniae

KCTC 2242

Complete

5.46

57.3

5,152

25

87

CP002910

Shin et al. (2012) [30]

Klebsiella pneumoniae pneumoniae

1084

Complete

5.39

57.4

4,962

25

79

CP003785

Lin et al. (2012) [27]

Klebsiella pneumoniae pneumoniae

NTUH-K2044

Complete

5.47

57.4

5,262

25

85

AP006725

Wu et al. (2009) [28]

Klebsiella pneumoniae pneumoniae

Ecl8

Complete (with gaps)

5.53

57.2

5,177

31

82

HF536482

Fookes et al. (2013) [29]

Klebsiella pneumoniae pneumoniae ozaenae

ATCC11296

Draft

4.95

57.5

4,818

3

62

CDJH0000000

Drancourt et al. (2001) [34]

Klebsiella pneumoniae pneumoniae rhinoscleromatis

Urmite

Draft

5.35

57.3

5,363

4

64

CDOT0000000

-

Klebsiella variicola

At–22

Complete

5.46

57.6

4,996

25

85

CP001891

Pinto-Tomas et al. (2009) [33]

Klebsiella oxytoca

E718

Complete

6.57

55.52

5,923

25

85

CP003683

Liao et al. (2012) [31]

Klebsiella oxytoca

KCTC 1628

Complete

5.98

56

5,340

25

85

CP00321

Shin et al. (2012) [32]

Klebsiella mobilis

EA1509E

Complete

5.59

54.93

5,117

26

88

FO203355

Diene et al. (2013) [2]