Table 1 List of WRKY III genes identified in Populus, Grape, Arabidopsis and Rice, their sequence characteristics
From: Comparative genomic analysis of the WRKY III gene family in populus, grape, arabidopsis and rice
Name | Gene Identifier | Chr | Location COORDINATES (5′- 3′) | ORF length (bp) | Protein | |||
|---|---|---|---|---|---|---|---|---|
Length (a.a.) | PI | Mol.Wt. (Da) | Exons | |||||
PtrWRKY41 | Potri.001G092900.1 | 1 | 7326486 - 7329009 | 1017 | 338 | 6.1 | 38600.47 | 3 |
PtrWRKY63 | Potri.002G168700.1 | 2 | 12778165 - 12781030 | 1092 | 363 | 6.04 | 41572.99 | 3 |
PtrWRKY53 | Potri.003G138600.1 | 3 | 15656901 - 15658916 | 1029 | 342 | 5.46 | 39024.98 | 3 |
PtrWRKY89 | Potri.006G109100.1 | 6 | Â 8522038 - 8524071 | 1002 | 333 | 6.24 | 38321.26 | 3 |
PtrWRKY30 | Potri.012G031700.1 | 12 | Â 2820069 - 2822264 | 1116 | 371 | 5.81 | 41993.43 | 3 |
PtrWRKY90 | Potri.013G090400.1 | 13 | Â 9549330 - 9551441 | 1059 | 352 | 5.97 | 39666.24 | 3 |
PtrWRKY54 | Potri.013G090300.1 | 13 | Â 9541636 - 9543313 | 975 | 324 | 5.48 | 37325.53 | 3 |
PtrWRKY64 | Potri.014G096200.1 | 14 | 7526597 - 7529192 | 1098 | 365 | 5.23 | 41813.27 | 3 |
PtrWRKY62 | Potri.016G137900.1 | 16 | 14049379 - 14051741  | 966 | 321 | 6.06 | 36678.63 | 3 |
PtrWRKY55 | Potri.019G059300.1 | 19 | 9106420 - 9108112 | 756 | 351 | 7.82 | 27324.05 | 3 |
VvWRKY6 | GSVIVT01019511001 | 2 | 1228314 - 1229702 | 1029 | 342 | 6.05 | 38561.86 | 3 |
VvWRKY27 | GSVIVT01030174001 | 8 | 10843756 - 10846082 | 996 | 331 | 5.76 | 37484.73 | 5 |
VvWRKY41 | GSVIVT01032662001 | 13 | 1716836 - 1718836 | 927 | 308 | 6.72 | 34255.17 | 4 |
VvWRKY42 | GSVIVT01032661001 | 13 | 1719393 - 1720884 | 867 | 288 | 5.71 | 32693.34 | 4 |
VvWRKY48 | GSVIVT01027069001 | 15 | 18191021 - 18193489 | 1083 | 360 | 5.16 | 40234 | 5 |
VvWRKY52 | GSVIVT01028718001 | 16 | 19477141 - 19479868 | 1095 | 364 | 5.45 | 40043.4 | 3 |
AtWRKY30 | AT5G24110.1 | 5 | 8153115 - 8154709 | 912 | 303 | 6.11 | 33985.32 | 3 |
AtWRKY38 | AT5G22570.1 | 5 | 7495539 - 7496784 | 870 | 289 | 5.4 | 33268.25 | 3 |
AtWRKY41 | AT4G11070.1 | 4 |  6759303–6760794  | 942 | 313 | 9.23 | 34894.21 | 3 |
AtWRKY46 | AT2G46400.1 | 2 | Â 19043414 - 19044826 | 888 | 295 | 5.73 | 33634.72 | 3 |
AtWRKY53 | AT4G23810.1 | 4 | 12392370 - 12393982 | 975 | 324 | 6.34 | 36272.58 | 2 |
AtWRKY54 | AT2G40750.1 | 2 | 17000454 - 17002468 | 1041 | 346 | 5.23 | 38645.28 | 3 |
AtWRKY55 | AT2G40740.1 | 2 | Â 16997177 - 16999277 | 879 | 292 | 7.69 | 32488.79 | 3 |
AtWRKY62 | AT5G01900.1 | 5 | 351008 - 352069 | 792 | 263 | 5.91 | 30442.52 | 2 |
AtWRKY63 | AT1G66600.1 | 1 | Â 24848320 - 24849364 | 726 | 241 | 5.63 | 27378.84 | 3 |
AtWRKY64 | AT1G66560.1 | 1 |  24833579–24834631  | 750 | 249 | 4.89 | 28549.92 | 3 |
AtWRKY66 | AT1G80590.1 | 1 | 30296210 - 30297156 | 708 | 235 | 5.8 | 26402.81 | 3 |
AtWRKY67 | AT1G66550.1 | 1 | 24828537 - 24829589 | 765 | 254 | 6.34 | 29039.72 | 3 |
AtWRKY70 | AT3G56400.1 | 3 | 20908928 - 20910481 | 885 | 294 | 5.85 | 32935.64 | 3 |
OsWRKY77 | LOC_Os01g40260.1 | 1 | Â 22731943 - 22733240 | 741 | 246 | 5.05 | 59691.44 | 3 |
OsWRKY11 | LOC_Os01g43650.1 | 1 | 25009453 - 25012236 | 1140 | 379 | 4.97 | 92538.29 | 3 |
OsWRKY17 | LOC_Os01g74140.1 | 1 | 42946753 - 42948750 | 1233 | 410 | 4.96 | 101998.04 | 3 |
OsWRKY20 | LOC_Os01g60540.1 | 1 | 35008866 - 35011098 | 1128 | 375 | 4.99 | 90787.21 | 3 |
OsWRKY21 | LOC_Os01g60640.1 | 1 | 35062734 - 35064940 | 843 | 280 | 5.03 | 67914.43 | 2 |
OsWRKY32 | LOC_Os02g53100.1 | 2 | 32489017 - 32495070 | 1815 | 604 | 4.88 | 145142.97 | 6 |
OsWRKY55 | LOC_Os03g20550.1 | 3 | 11650824 - 11652144 | 633 | 210 | 5.14 | 52608.57 | 3 |
OsWRKY80 | LOC_Os03g63810.1 | 3 | 36039164 - 36043822 | 1164 | 387 | 4.96 | 97006.11 | 3 |
OsWRKY68 | LOC_Os04g51560.1 | 4 | 30545175 - 30546577 | 930 | 309 | 4.96 | 78001.61 | 3 |
OsWRKY5 | LOC_Os05g04640.1 | 5 | 2179520 - 2184940 | 1509 | 502 | 4.89 | 122971.29 | 6 |
OsWRKY53 | LOC_Os05g27730.1 | 5 | 16150266 - 16152747 | 1464 | 487 | 4.89 | 119588.82 | 5 |
OsWRKY48 | LOC_Os05g40060.1 | 5 | 23529423 - 23530499 | 996 | 331 | 5 | 80700.18 | 2 |
OsWRKY84 | LOC_Os05g40070.1 | 5 | 23536113 - 23539013 | 843 | 280 | 5.06 | 68885.55 | 3 |
OsWRKY54 | LOC_Os05g40080.1 | 5 | 23550611 - 23551716 | 987 | 328 | 5.01 | 80020.28 | 2 |
OsWRKY49 | LOC_Os05g49100.1 | 5 | 28154693 - 28157989 | 1260 | 419 | 4.95 | 101051.58 | 3 |
OsWRKY19 | LOC_Os05g49620.1 | 5 | 28471802 - 28473061 | 834 | 277 | 5.04 | 67350.85 | 3 |
OsWRKY31 | LOC_Os06g30860.1 | 6 | 17915923 - 17917083 | 1041 | 346 | 4.97 | 84041.8 | 2 |
OsWRKY87 | LOC_Os07g39480.1 | 7 | 23654076 - 23659625 | 1857 | 618 | 4.93 | 152671 | 6 |
OsWRKY88 | LOC_Os07g40570.1 | 7 | 24311898 - 24315383 | 1299 | 432 | 5 | 106573.1 | 4 |
OsWRKY89 | LOC_Os08g17400.1 | 8 | 10633195 - 10639603 | 1653 | 550 | 4.99 | 130711.96 | 4 |
OsWRKY69 | LOC_Os08g29660.1 | 8 | 18220041 - 18222408 | 960 | 319 | 4.97 | 78415.14 | 2 |
OsWRKY90 | LOC_Os09g30400.3 | 9 | 18496949 - 18500579 | 1902 | 633 | 4.91 | 157640.64 | 5 |
OsWRKY18 | LOC_Os10g18099.1 | 10 | Â 9184625 - 9192018 | 831 | 276 | 5.04 | 68355.38 | 3 |
OsWRKY72 | LOC_Os11g29870.1 | 11 | 17352085 - 17355820 | 729 | 242 | 5.06 | 59599.38 | 2 |
OsWRKY97 | LOC_Os12g02420.1 | 12 | 802489 - 806097 | 675 | 224 | 5.09 | 56271.46 | 3 |
OsWRKY64 | LOC_Os12g02450.1 | 12 | 824302 - 825793 | 966 | 321 | 5.04 | 79376.04 | 3 |
OsWRKY96 | LOC_Os12g32250.1 | 12 | 19473728 - 19478606 | 1623 | 540 | 4.93 | 133380.3 | 6 |
OsWRKY94 | LOC_Os12g40570.1 | 12 | 25100479 - 25104175 | 1098 | 365 | 5.03 | 87261.58 | 4 |