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Fig. 4 | Biology Direct

Fig. 4

From: dissectHMMER: a HMMER-based score dissection framework that statistically evaluates fold-critical sequence segments for domain fold similarity

Fig. 4

Histograms of remnant segment lengths (i.e. continuous stretches of remnant residues of >10AA) for the PDB/DSSP-derived and predictor-derived Pfam domain sets. A total of 12,253 and 33,774 remnant segments were derived from the 6599 PDB/DSSP-derived and 14,831 predictor-derived domain set respectively. With reference to small domain model of about 40 AA (609 Pfam domains are of lengths 40 AAs or less), the respective domain sets contain 14.6 % (1789 out of 12,253; see dotted line) and 15.3 % (5155 out of 33,774; see dotted line) of remnant segments with lengths exceeding 40AA

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