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Fig. 3 | Biology Direct

Fig. 3

From: dissectHMMER: a HMMER-based score dissection framework that statistically evaluates fold-critical sequence segments for domain fold similarity

Fig. 3

Ratio of remnant residues versus total residues per domain model for the sets of 6599 PDB/DSSP-derived and 14,831 predictor-derived Pfam domain annotations. At a ratio of >0.5, 26.8 % (1767 out of 6599; see dotted line) and 10.3 % (1522 out of 14,831; see dotted line) of the domains from the PDB/DSSP-derived and predictor-derived sets have more remnant residues than fold-critical residues in each of these models respectively. In addition, 8 PDB/DSSP-derived and 44 predictor-derived domain models have no fold-critical residues (ratio of 1) and they contain either compositionally-biased or disordered sequences

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Biology Direct

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