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Fig. 8 | Biology Direct

Fig. 8

From: Modeling of interaction between cytochrome c and the WD domains of Apaf-1: bifurcated salt bridges underlying apoptosome assembly

Fig. 8

Geometry of bifurcated salt bridges. a, Values of the angle between Cα atoms for complex salt bridges in the PatchDock’ model structure after energy minimization. b, Values of the angle between Cα atoms for the same structure during the MD simulation. Values for the Asp792-Lys39-Glu793 salt bridge are not shown due to the high mobility of the respective loop of Apaf-1 (residues 785–805)

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