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Table 2 The summary of PPIs sets used in the analysis

From: Co-regulation of translation in protein complexes

Organism

PPIs set

Source

#PPIs

#PPIs-h

#PPIs-R

E.coli

binary

Rajagopala et al. [31]

2 067

1 671

427

 

co-complex

Hu et al. [25]

4 515

4 515

1 219

 

operon

ProOpDB, 03-04-2014 [40]

4 989

4 989

1 311

S.cerevisiae

binary

Yu et al. [16]

2 930

2 705

1 965

 

co-complex

Yu et al. [16]

9 070

9 070

6 115

H.sapiens

binary

HPRD, 02-28-2014 [30]

39 240

37 039

14 395

 

co-complex

HPRD, 02-28-2014 [30]

31 237

23 918

11 506

  1. Column description: (source) the references of protein-protein interactions sets with accession dates for on-line databases; (#PPIs) number of PPIs provided by the source; (#PPIs-h) number of heterodimeric interactions in the set; and (#PPIs-R) number of heterodimeric PPIs, for which both interacting partners are attributed with the value of the protein production rate R – these interactions were used in the analysis.