Table 1 Mapping statistics for the mouse CD4 + cell mRNA-seq samples
Cell type | Total reads | Uniquely mapped reads | % uniquely mapped |
|---|---|---|---|
Naive A | 190175282 | 172714808 | 90.8 |
Naive B | 291840162 | 274412494 | 94.0 |
Th1 A | 101511893 | 91658389 | 90.3 |
Th1 B | 86944521 | 77724382 | 89.4 |
Th2 A | 102603764 | 89652943 | 87.4 |
Th2 B | 103927555 | 91223060 | 87.8 |
Th17 A | 83276214 | 71017085 | 85.3 |
Th17 B | 289793662 | 226405227 | 78.1 |
iTreg A | 13501869 | 10031784 | 74.3 |
iTreg B | 53187059 | 39277954 | 73.8 |
Treg A | 33430348 | 28411431 | 85.0 |
Treg B | 31409616 | 26002127 | 82.8 |