Table 4 The down-regulated fold of specific genes in TCs as compared with others in chromosome 17

1600014C23Rik

2.69/3.97

1.21/1.78

12.47/18.43

2.66/3.93

2.55/3.77

9.29/13.72

7.04/10.40

2310061I04Rik

1.54/1.80

1.27/1.49

6.68/7.82

3.66/4.29

3.06/3.58

6.36/7.44

6.74/7.89

4930539E08Rik

1.40/1.69

1.07/1.29

5.65/6.83

31.25/37.81

38.16/46.16

32.79/39.68

24.54/29.69

5430411C19Rik

2.30/2.15

1.13/1.05

3.40/3.18

23.14/21.65

15.46/14.47

7.61/7.12

14.76/13.81

A630033E08Rik

2.67/3.15

1.24/1.46

7.91/9.35

29.81/35.22

41.89/49.49

20.02/23.65

6.67/7.88

Atl2

1.32/1.84

2.22/3.10

21.29/29.73

14.23/19.88

13.07/18.25

33.45/46.71

32.74/45.72

Atp6v1g2

1.05/1.44

1.72/2.36

2.20/3.02

1.80/2.47

1.61/2.20

2.38/3.26

3.17/4.34

BC003965

2.62/2.97

1.70/1.93

8.77/9.92

21.82/24.69

17.18/19.44

39.62/44.82

25.30/28.62

BC011426

1.06/1.32

1.25/1.56

5.65/7.04

15.51/19.30

18.28/22.76

1.50/1.86

3.09/3.85

BC051142

1.12/1.60

1.16/1.67

1.38/1.98

2.89/4.15

1.45/2.08

3.18/4.58

2.00/2.87

Cdc5l

1.79/1.69

2.19/2.08

171.49/162.64

269.71/255.80

210.90/200.03

271.87/257.85

238.68/226.37

Clpp

1.05/1.06

1.63/1.64

6.30/6.34

4.95/4.97

3.45/3.47

8.03/8.08

7.75/7.79

Cox7a2l

1.42/2.18

1.21/1.87

1.41/2.17

3.45/5.30

2.34/3.60

4.80/7.39

3.91/6.02

Dpp9

1.33/1.63

1.44/1.76

18.97/23.22

8.31/10.17

5.90/7.22

3.96/4.84

2.59/3.17

Dpy30

1.38/2.23

1.11/1.78

6.93/11.15

12.89/20.76

7.90/12.73

16.78/27.02

15.21/24.49

E4f1

1.60/1.63

2.12/2.16

2.86/2.92

14.41/14.68

23.06/23.50

3.05/3.11

2.74/2.79

Eml4

1.08/1.61

4.20/6.27

1.20/1.79

2.43/3.63

2.77/4.15

2.32/3.47

2.45/3.66

Gabbr1

1.09/1.34

3.45/4.23

9.29/11.39

29.00/35.58

35.59/43.67

19.70/24.17

12.19/14.96

Glo1

3.48/4.60

1.46/1.93

3.77/4.98

3.69/4.87

2.29/3.03

4.37/5.77

6.12/8.08

Gm88

1.52/1.02

2.10/1.41

52.54/35.36

11.10/7.47

8.02/5.40

73.00/49.13

27.98/18.83

H2-M3

1.86/1.96

3.10/3.27

4.80/5.07

50.87/53.67

44.63/47.09

10.46/11.04

6.11/6.45

Hn1l

2.75/4.64

2.51/4.24

6.48/10.95

2.83/4.79

1.18/2.00

4.37/7.39

7.69/13.00

Hsf2bp

4.35/4.89

1.34/1.50

4.61/5.18

4.61/5.19

7.26/8.16

7.73/8.69

14.52/16.33

Khsrp

1.29/1.72

1.16/1.55

2.24/2.99

3.88/5.18

3.32/4.43

16.48/22.01

13.07/17.45

Mdc1

1.52/1.72

2.00/2.26

3.04/3.45

2.69/3.05

2.71/3.07

4.07/4.60

2.42/2.74

Mettl4

1.26/1.67

1.32/1.75

1.34/1.77

3.57/4.74

3.75/4.98

7.81/10.37

4.95/6.57

Mrps18a

2.16/3.03

1.25/1.75

2.71/3.80

1.90/2.67

1.52/2.14

3.50/4.91

3.08/4.32

Msh6

1.26/1.82

2.07/3.00

1.92/2.78

3.44/4.99

2.42/3.51

3.41/4.94

2.44/3.53

Ndufv2

1.76/2.27

1.52/1.96

1.42/1.82

1.64/2.11

1.59/2.05

2.38/3.06

2.02/2.60

Pdcd2

1.57/1.98

2.66/3.36

1.83/2.31

3.34/4.22

2.81/3.55

2.83/3.58

2.09/2.65

Pdpk1

1.51/2.36

1.27/1.99

1.17/1.83

3.12/4.88

2.17/3.41

1.46/2.29

1.74/2.72

Phf1

1.10/1.17

1.92/2.04

19.66/20.88

6.46/6.86

9.04/9.61

4.90/5.21

3.46/3.67

Pknox1

1.27/1.17

1.89/1.75

21.31/19.71

25.53/23.61

19.15/17.71

25.79/23.86

24.24/22.42

Polr1c

1.49/2.18

1.37/2.00

9.61/14.04

7.75/11.33

6.96/10.18

11.71/17.11

9.91/14.48

Prrt1

2.80/2.43

1.92/1.67

6.39/5.55

6.29/5.46

11.82/10.27

2.39/2.08

1.41/1.23

Psors1c2

6.73/5.81

1.31/1.13

12.72/10.98

13.83/11.94

12.50/10.79

8.46/7.30

8.08/6.98

Rab5a

1.08/1.42

1.34/1.75

4.47/5.86

7.74/10.15

8.45/11.08

3.48/4.56

3.64/4.78

Rdbp

1.22/1.55

1.48/1.88

1.93/2.45

2.51/3.18

1.42/1.80

4.19/5.32

3.61/4.58

Ring1

1.28/1.35

1.05/1.11

59.34/62.76

20.66/21.85

3.77/3.99

92.26/97.58

73.81/78.07

Rnps1

1.49/1.83

1.67/2.05

20.20/24.85

60.50/74.42

53.28/65.54

44.57/54.83

47.99/59.03

Skiv2l

1.44/1.33

1.55/1.44

25.93/24.00

24.77/22.93

20.72/19.18

4.41/4.09

3.28/3.04

Slc22a1

1.79/2.00

1.58/1.76

7.12/7.94

1.22/1.36

1.48/1.65

11.28/12.57

11.06/12.33

Slc25a23

1.03/1.45

1.28/1.79

44.78/62.78

3.84/5.38

2.57/3.61

40.36/56.58

32.46/45.51

Solh

1.21/1.22

1.24/1.24

88.56/89.01

148.74/149.50

153.65/154.43

111.96/112.53

76.12/76.51

Srd5a2

1.05/1.37

1.09/1.43

2.87/3.76

6.38/8.38

2.32/3.05

5.92/7.78

4.08/5.36

Srrm2

1.13/1.54

1.79/2.42

24.93/33.79

39.53/53.59

62.88/85.24

31.91/43.25

19.68/26.67

Stk38

1.55/1.43

1.09/1.00

10.55/9.75

64.22/59.33

56.48/52.17

28.77/26.58

12.08/11.16

Supt3h

1.91/1.52

2.66/2.12

15.28/12.16

16.32/12.98

12.85/10.22

49.56/39.43

27.98/22.27

Sytl3

1.15/1.28

1.06/1.19

4.59/5.14

4.63/5.18

6.65/7.44

10.58/11.85

5.56/6.23

Taf8

1.47/1.50

1.87/1.90

2.86/2.90

3.23/3.28

2.51/2.55

4.39/4.45

2.28/2.31

Tap1

3.12/2.15

1.91/1.32

25.60/17.68

173.22/119.61

180.68/124.76

46.31/31.97

36.19/24.99

Tbc1d5

1.03/1.16

1.53/1.72

1.16/1.31

1.18/1.33

1.32/1.49

2.09/2.35

1.13/1.27

Tbp

1.01/1.45

2.31/3.33

1.11/1.60

2.79/4.02

1.77/2.56

1.87/2.70

1.09/1.58

Tcf19

1.65/2.21

1.26/1.68

2.05/2.74

3.70/4.95

2.53/3.38

2.89/3.86

2.89/3.87

Telo2

1.35/1.69

1.69/2.13

1.35/1.70

1.43/1.80

1.35/1.69

4.90/6.16

3.84/4.83

Thumpd2

1.66/1.62

1.38/1.35

1.52/1.48

4.88/4.77

4.47/4.37

5.39/5.27

2.68/2.62

Wdr27

1.30/1.15

1.28/1.13

8.01/7.09

2.61/2.31

3.82/3.38

15.14/13.40

1.80/1.60

Wdr43

1.08/1.44

3.01/4.00

1.89/2.52

3.40/4.52

3.56/4.73

4.38/5.83

6.09/8.10

Zfp101

3.45/4.24

1.27/1.56

3.57/4.39

14.70/18.07

15.77/19.38

6.56/8.06

2.51/3.09

Zfp160

1.94/2.10

1.67/1.81

2.14/2.32

14.45/15.68

10.13/10.99

2.96/3.22

2.67/2.90

Zfp161

1.70/1.76

1.71/1.77

5.14/5.32

10.17/10.51

10.33/10.67

14.79/15.28

4.90/5.07

Zfp318

1.11/1.54

2.00/2.77

1.53/2.11

3.15/4.36

2.63/3.65

4.30/5.95

2.39/3.31

Zfp472

1.85/2.12

1.17/1.34

4.32/4.94

45.25/51.74

33.07/37.81

2.46/2.82

1.59/1.82

Zfp54

1.24/1.86

1.08/1.61

1.75/2.63

5.39/8.08

7.68/11.52

1.90/2.85

1.47/2.20

Zfp563

2.16/2.00

1.39/1.29

5.71/5.28

9.05/8.37

4.10/3.79

12.25/11.33

6.19/5.72

Zfp677

1.32/2.15

1.02/1.66

2.43/3.96

12.31/20.09

14.11/23.02

2.32/3.79

1.10/1.80

Znrd1

1.29/1.64

1.17/1.49

1.82/2.31

2.95/3.74

2.57/3.26

1.88/2.39

1.61/2.04

C030034I22Rik

5.83/6.02

3.09/3.18

3.61/3.72

26.28/27.11

28.59/29.49

10.78/11.11

5.35/5.52