Table 1 Categories of platelet transcripts
Category | Average number of expressed elements | Number of elements in intersection of all 10 samples | Number of elements in union of all 10 samples |
|---|---|---|---|
Protein coding genes | 7,590 | 5,592 | 10,079 |
pseudogenes | 1,275 | 706 | 2,356 |
lncRNAs | 151 | 80 | 287 |
DNA repeats | 1,986 | 223 | 3,833 |
LINE | 5,012 | 591 | 8,545 |
Low complexity repeats | 1,613 | 310 | 4,079 |
LTR repeats | 2,725 | 508 | 3,676 |
Other repeats | 24 | 9 | 16 |
RC repeats | 8 | 2 | 14 |
RNA repeats | 34 | 9 | 1,522 |
Simple repeats | 2,846 | 410 | 9,980 |
rRNA repeats | 213 | 135 | 268 |
Satellites | 15 | 4 | 23 |
scRNA | 447 | 272 | 574 |
SINE | 10,319 | 911 | 13,782 |
snRNA | 60 | 18 | 113 |
srpRNA | 260 | 124 | 275 |
tRNA | 123 | 47 | 253 |
Unknown repeats | 32 | 6 | 56 |
(Purely) Intronic | 28,636 | 4,323 | 161,826 |
(Unannotated) Intergenic | 9,876 | 2,208 | 41,666 |