TY - JOUR AU - Gilbert, W. PY - 1986 DA - 1986// TI - The RNA world JO - Nature VL - 319 UR - https://doi.org/10.1038/319618a0 DO - 10.1038/319618a0 ID - Gilbert1986 ER - TY - JOUR AU - Joyce, G. F. PY - 2002 DA - 2002// TI - The antiquity of RNA-based evolution JO - Nature VL - 418 UR - https://doi.org/10.1038/418214a DO - 10.1038/418214a ID - Joyce2002 ER - TY - JOUR AU - Szathmary, E. AU - Demeter, L. PY - 1987 DA - 1987// TI - Group selection of early replicators and origin of life JO - J Theor Biol VL - 128 UR - https://doi.org/10.1016/S0022-5193(87)80191-1 DO - 10.1016/S0022-5193(87)80191-1 ID - Szathmary1987 ER - TY - JOUR AU - Zintzaras, E. AU - Santos, M. AU - Szathmary, E. PY - 2002 DA - 2002// TI - “Living” under the challenge of information decay: the stochastic corrector model vs. hypercycles JO - J Theor Biol VL - 217 UR - https://doi.org/10.1006/jtbi.2002.3026 DO - 10.1006/jtbi.2002.3026 ID - Zintzaras2002 ER - TY - JOUR AU - Fontanari, J. F. AU - Santos, M. AU - Szathmary, E. PY - 2006 DA - 2006// TI - Coexistence and error propagation in pre-biotic vesicle models: a group selection approach JO - J Theor Biol VL - 239 UR - https://doi.org/10.1016/j.jtbi.2005.08.039 DO - 10.1016/j.jtbi.2005.08.039 ID - Fontanari2006 ER - TY - JOUR AU - Szathmary, E. PY - 2006 DA - 2006// TI - The origin of replicators and reproducers JO - Philos Trans R Soc Lond B Biol Sci VL - 361 UR - https://doi.org/10.1098/rstb.2006.1912 DO - 10.1098/rstb.2006.1912 ID - Szathmary2006 ER - TY - JOUR AU - Ma, W. T. AU - Hu, J. M. PY - 2012 DA - 2012// TI - Computer simulation on the cooperation of functional molecules during the early stages of evolution JO - PLoS One VL - 7 UR - https://doi.org/10.1371/journal.pone.0035454 DO - 10.1371/journal.pone.0035454 ID - Ma2012 ER - TY - JOUR AU - Maynard-Smith, J. AU - Szathmary, E. PY - 1993 DA - 1993// TI - The origin of chromosomes I. Selection for linkage JO - J Theor Biol VL - 164 UR - https://doi.org/10.1006/jtbi.1993.1165 DO - 10.1006/jtbi.1993.1165 ID - Maynard-Smith1993 ER - TY - JOUR AU - Takeuchi, N. AU - Hogeweg, P. AU - Koonin, E. V. PY - 2011 DA - 2011// TI - On the origin of DNA genomes: evolution of the division of labor between template and catalyst in model replicator systems JO - PLoS Comput Biol VL - 7 UR - https://doi.org/10.1371/journal.pcbi.1002024 DO - 10.1371/journal.pcbi.1002024 ID - Takeuchi2011 ER - TY - JOUR AU - Diener, T. O. PY - 1989 DA - 1989// TI - Circular RNAs: relics of precellular evolution? JO - Proc Natl Acad Sci U S A VL - 86 UR - https://doi.org/10.1073/pnas.86.23.9370 DO - 10.1073/pnas.86.23.9370 ID - Diener1989 ER - TY - JOUR AU - Hutchins, C. J. AU - Rathjen, P. D. AU - Forster, A. C. AU - Symons, R. H. PY - 1986 DA - 1986// TI - Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid JO - Nucleic Acids Res VL - 14 UR - https://doi.org/10.1093/nar/14.9.3627 DO - 10.1093/nar/14.9.3627 ID - Hutchins1986 ER - TY - CHAP AU - Duran-Vila, N. AU - Elena, S. F. AU - Daros, J. A. AU - Flores, R. ED - Domingo, E. ED - Parrish, C. R. ED - Holland, J. J. PY - 2008 DA - 2008// TI - Structure and evolution of viroids BT - Origin and evolution of viruses PB - Elsevier CY - Oxford UR - https://doi.org/10.1016/B978-0-12-374153-0.00002-3 DO - 10.1016/B978-0-12-374153-0.00002-3 ID - Duran-Vila2008 ER - TY - JOUR AU - Prody, G. A. AU - Bakos, J. T. AU - Buzayan, J. M. AU - Schneider, I. R. AU - Bruening, G. PY - 1986 DA - 1986// TI - Autolytic processing of dimeric plant virus satellite RNA JO - Science VL - 231 UR - https://doi.org/10.1126/science.231.4745.1577 DO - 10.1126/science.231.4745.1577 ID - Prody1986 ER - TY - JOUR AU - Haseloff, J. AU - Gerlach, W. L. PY - 1988 DA - 1988// TI - Simple RNA enzymes with new and highly specific endoribonuclease activities JO - Nature VL - 334 UR - https://doi.org/10.1038/334585a0 DO - 10.1038/334585a0 ID - Haseloff1988 ER - TY - JOUR AU - Hammann, C. AU - Lilley, D. M. J. PY - 2002 DA - 2002// TI - Folding and activity of the hammerhead ribozyme JO - Chembiochem VL - 3 ID - Hammann2002 ER - TY - JOUR AU - De la Pena, M. AU - Garcia-Robles, I. PY - 2010 DA - 2010// TI - Ubiquitous presence of the hammerhead ribozyme motif along the tree of life JO - RNA VL - 16 UR - https://doi.org/10.1261/rna.2130310 DO - 10.1261/rna.2130310 ID - De la Pena2010 ER - TY - JOUR AU - De la Pena, M. AU - Garcia-Robles, I. PY - 2010 DA - 2010// TI - Intronic hammerhead ribozymes are ultraconserved in the human genome JO - EMBO Rep VL - 11 UR - https://doi.org/10.1038/embor.2010.100 DO - 10.1038/embor.2010.100 ID - De la Pena2010 ER - TY - JOUR AU - Ma, W. T. AU - Yu, C. W. AU - Zhang, W. T. AU - Hu, J. M. PY - 2010 DA - 2010// TI - A simple template-dependent ligase ribozyme as the RNA replicase emerging first in the RNA world JO - Astrobiology VL - 10 UR - https://doi.org/10.1089/ast.2009.0385 DO - 10.1089/ast.2009.0385 ID - Ma2010 ER - TY - JOUR AU - Ma, W. T. AU - Yu, C. W. AU - Zhang, W. T. AU - Hu, J. M. PY - 2007 DA - 2007// TI - Nucleotide synthetase ribozymes may have emerged first in the RNA world JO - RNA VL - 13 UR - https://doi.org/10.1261/rna.658507 DO - 10.1261/rna.658507 ID - Ma2007 ER - TY - JOUR AU - Ma, W. T. AU - Yu, C. W. AU - Zhang, W. T. AU - Zhou, P. AU - Hu, J. M. PY - 2010 DA - 2010// TI - The emergence of ribozymes synthesizing membrane components in RNA-based protocells JO - Biosystems VL - 99 UR - https://doi.org/10.1016/j.biosystems.2009.11.003 DO - 10.1016/j.biosystems.2009.11.003 ID - Ma2010 ER - TY - JOUR AU - Houseley, J. AU - Tollervey, D. PY - 2009 DA - 2009// TI - The many pathways of RNA degradation JO - Cell VL - 136 UR - https://doi.org/10.1016/j.cell.2009.01.019 DO - 10.1016/j.cell.2009.01.019 ID - Houseley2009 ER - TY - JOUR AU - Li, Y. F. AU - Breaker, R. R. PY - 1999 DA - 1999// TI - Kinetics of RNA degradation by specific base catalysis of transesterification involving the 2′-hydroxyl group JO - J Am Chem Soc VL - 121 UR - https://doi.org/10.1021/ja990592p DO - 10.1021/ja990592p ID - Li1999 ER - TY - JOUR AU - Soukup, G. A. AU - Breaker, R. R. PY - 1999 DA - 1999// TI - Relationship between internucleotide linkage geometry and the stability of RNA JO - RNA VL - 5 UR - https://doi.org/10.1017/S1355838299990891 DO - 10.1017/S1355838299990891 ID - Soukup1999 ER - TY - JOUR AU - Lopez-Alonso, J. P. AU - Pardo-Cea, M. A. AU - Gomez-Pinto, I. AU - Fernandez, I. AU - Chakrabartty, A. AU - Pedroso, E. AU - Gonzalez, C. AU - Laurents, D. V. PY - 2010 DA - 2010// TI - Putative one-pot prebiotic polypeptides with ribonucleolytic activity JO - Chem Eur J VL - 16 UR - https://doi.org/10.1002/chem.200903207 DO - 10.1002/chem.200903207 ID - Lopez-Alonso2010 ER - TY - JOUR AU - Ciciriello, F. AU - Costanzo, G. AU - Pino, S. AU - Crestini, C. AU - Saladino, R. AU - Di Mauro, E. PY - 2008 DA - 2008// TI - Molecular complexity favors the evolution of ribopolymers JO - Biogeosciences VL - 47 ID - Ciciriello2008 ER - TY - JOUR AU - Walker, S. I. AU - Grover, M. A. AU - Hud, N. V. PY - 2012 DA - 2012// TI - Universal sequence replication, reversible polymerization and early functional biopolymers: a model for the initiation of prebiotic sequence evolution JO - PLoS One VL - 7 UR - https://doi.org/10.1371/journal.pone.0034166 DO - 10.1371/journal.pone.0034166 ID - Walker2012 ER - TY - JOUR AU - Chen, I. A. AU - Roberts, R. W. AU - Szostak, J. W. PY - 2004 DA - 2004// TI - The emergence of competition between model protocells JO - Science VL - 305 UR - https://doi.org/10.1126/science.1100757 DO - 10.1126/science.1100757 ID - Chen2004 ER - TY - JOUR AU - Donnan, F. G. PY - 1995 DA - 1995// TI - Theory of membrane equilibria and membrane potentials in the presence of non-dialysing electrolytes. A contribution to physical-chemical physiology JO - J Mem Sci VL - 100 UR - https://doi.org/10.1016/0376-7388(94)00297-C DO - 10.1016/0376-7388(94)00297-C ID - Donnan1995 ER - TY - JOUR AU - Kazakov, S. A. AU - Balatskaya, S. V. AU - Johnston, B. H. PY - 2006 DA - 2006// TI - Ligation of the hairpin ribozyme in cis induced by freezing and dehydration JO - RNA VL - 12 UR - https://doi.org/10.1261/rna.2123506 DO - 10.1261/rna.2123506 ID - Kazakov2006 ER - TY - CHAP AU - Dallas, A. AU - Vlassov, A. V. AU - Kazakov, S. A. ED - Gross, H. J. PY - 2004 DA - 2004// TI - Principles of cleavage of nucleic acids by metal ions BT - Nucleic acids and molecular biology PB - Springer-Verlag CY - Heidelberg, Germany ID - Dallas2004 ER - TY - JOUR AU - Pyle, A. M. PY - 1993 DA - 1993// TI - Ribozymes: a distinct class of metalloenzymes JO - Science VL - 261 UR - https://doi.org/10.1126/science.7688142 DO - 10.1126/science.7688142 ID - Pyle1993 ER - TY - JOUR AU - Kazakov, S. A. AU - Altman, S. PY - 2013 DA - 2013// TI - A trinucleotide can promote metal ion-dependent specific cleavage JO - Proc Natl Acad Sci U S A VL - 89 UR - https://doi.org/10.1073/pnas.89.17.7939 DO - 10.1073/pnas.89.17.7939 ID - Kazakov2013 ER - TY - JOUR AU - Kumar, P. AU - Johnston, B. H. AU - Kazakov, S. A. PY - 2011 DA - 2011// TI - miR-ID: a novel, circularization-based platform for detection of microRNAs JO - RNA VL - 17 UR - https://doi.org/10.1261/rna.2490111 DO - 10.1261/rna.2490111 ID - Kumar2011 ER - TY - JOUR AU - Johnston, W. K. AU - Unrau, P. J. AU - Lawrence, M. S. AU - Glasner, M. E. AU - Bartel, D. P. PY - 2001 DA - 2001// TI - RNA-catalyzed RNA polymerization: accurate and general RNA-templated primer extension JO - Science VL - 292 UR - https://doi.org/10.1126/science.1060786 DO - 10.1126/science.1060786 ID - Johnston2001 ER - TY - JOUR AU - Ma, W. T. AU - Yu, C. W. AU - Zhang, W. T. PY - 2007 DA - 2007// TI - Monte Carlo simulation of early molecular evolution in the RNA world JO - Biosystems VL - 90 UR - https://doi.org/10.1016/j.biosystems.2006.06.005 DO - 10.1016/j.biosystems.2006.06.005 ID - Ma2007 ER - TY - JOUR AU - Taylor, J. M. PY - 2003 DA - 2003// TI - Replication of human hepatitis delta virus: recent developments JO - Trends Microbiol VL - 11 UR - https://doi.org/10.1016/S0966-842X(03)00045-3 DO - 10.1016/S0966-842X(03)00045-3 ID - Taylor2003 ER - TY - CHAP AU - Quer, J. AU - Martell, M. AU - Rodriguez, A. AU - Bosch, A. ED - Domingo, E. ED - Parrish, C. R. ED - Holland, J. J. PY - 2008 DA - 2008// TI - The impact of rapid evolution of Hepatitis viruses BT - Origin and evolution of viruses PB - Elsevier CY - Oxford UR - https://doi.org/10.1016/B978-0-12-374153-0.00015-1 DO - 10.1016/B978-0-12-374153-0.00015-1 ID - Quer2008 ER -