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Table 2 Estimated completion of the A. pompejana proteome

From: Deep transcriptome-sequencing and proteome analysis of the hydrothermal vent annelid Alvinella pompejana identifies the CvP-bias as a robust measure of eukaryotic thermostability

 

C. teleta

A. pompejana

  

JGI + Genoscope (Existing data)

MPI (New data)

MPI + JGI + Genoscope (Combined data)

JGI + Genoscope full length (Existing data)

MPI full length (New data)

MPI + JGI + Genoscope full length (Combined data)

Hits to all 14 animals

1164 (100%)

932 (80%)

1017 (87%)

1074 (92%)

639 (55%)

708 (61%)

859 (74%)

Hits to all 22 eukaryotes

3958 (100%)

3862 (98%)

3849 (97%)

3922 (99%)

3036 (77%)

3179 (80%)

3454 (87%)

  1. Number of BLAST hits in the different A. pompejana datasets using two subsets of the Capitella proteome: sequences that only give hits in all of the 14 animals included, but not outside metazoa (hits to all 14 animals only), and sequences that have hits in all 14 animals included and 8 other non-metazoan eukaryotes. Total number of hits is given as well as the percentage of a hit relative to the total number of Capitella queries (100%).
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Biology Direct

ISSN: 1745-6150

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