Principle Method | Reference | Software |
---|---|---|
Graph edit distance | [106] | |
Gene-set co-expression analysis (GSCA) | [107] | |
Differential co-expression (dCoxS) between gene-sets | [108] | |
DiffCoEx | [109] | R code is provided in the paper |
Differential disease network using C3NET | c3net (http://cran.r-project.org/web/packages/c3net/index.html) | |
Disease associated interactions using Synergy network | [111] | MATLAB code is provided in the paper |