TY - JOUR AU - Mojica, F. J. AU - Diez-Villasenor, C. AU - Soria, E. AU - Juez, G. PY - 2000 DA - 2000// TI - Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria JO - Mol Microbiol VL - 36 UR - https://doi.org/10.1046/j.1365-2958.2000.01838.x DO - 10.1046/j.1365-2958.2000.01838.x ID - Mojica2000 ER - TY - JOUR AU - Jansen, R. AU - Embden, J. D. AU - Gaastra, W. AU - Schouls, L. M. PY - 2002 DA - 2002// TI - Identification of genes that are associated with DNA repeats in prokaryotes JO - Mol Microbiol VL - 43 UR - https://doi.org/10.1046/j.1365-2958.2002.02839.x DO - 10.1046/j.1365-2958.2002.02839.x ID - Jansen2002 ER - TY - JOUR AU - Horvath, P. AU - Barrangou, R. PY - 2010 DA - 2010// TI - CRISPR/Cas, the immune system of bacteria and archaea JO - Science VL - 327 UR - https://doi.org/10.1126/science.1179555 DO - 10.1126/science.1179555 ID - Horvath2010 ER - TY - JOUR AU - Jansen, R. AU - van Embden, J. D. AU - Gaastra, W. AU - Schouls, L. M. PY - 2002 DA - 2002// TI - Identification of a novel family of sequence repeats among prokaryotes JO - Omics: a journal of integrative biology VL - 6 UR - https://doi.org/10.1089/15362310252780816 DO - 10.1089/15362310252780816 ID - Jansen2002 ER - TY - JOUR AU - Bolotin, A. AU - Quinquis, B. AU - Sorokin, A. AU - Ehrlich, S. D. PY - 2005 DA - 2005// TI - Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin JO - Microbiology VL - 151 UR - https://doi.org/10.1099/mic.0.28048-0 DO - 10.1099/mic.0.28048-0 ID - Bolotin2005 ER - TY - JOUR AU - Mojica, F. J. AU - Diez-Villasenor, C. AU - Garcia-Martinez, J. AU - Soria, E. PY - 2005 DA - 2005// TI - Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements JO - J Mol Evol VL - 60 UR - https://doi.org/10.1007/s00239-004-0046-3 DO - 10.1007/s00239-004-0046-3 ID - Mojica2005 ER - TY - JOUR AU - Pourcel, C. AU - Salvignol, G. AU - Vergnaud, G. PY - 2005 DA - 2005// TI - CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies JO - Microbiology VL - 151 UR - https://doi.org/10.1099/mic.0.27437-0 DO - 10.1099/mic.0.27437-0 ID - Pourcel2005 ER - TY - JOUR AU - Makarova, K. S. AU - Grishin, N. V. AU - Shabalina, S. A. AU - Wolf, Y. I. AU - Koonin, E. V. PY - 2006 DA - 2006// TI - A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action JO - Biology direct VL - 1 UR - https://doi.org/10.1186/1745-6150-1-7 DO - 10.1186/1745-6150-1-7 ID - Makarova2006 ER - TY - JOUR AU - Barrangou, R. AU - Fremaux, C. AU - Deveau, H. AU - Richards, M. AU - Boyaval, P. AU - Moineau, S. AU - Romero, D. A. AU - Horvath, P. PY - 2007 DA - 2007// TI - CRISPR provides acquired resistance against viruses in prokaryotes JO - Science VL - 315 UR - https://doi.org/10.1126/science.1138140 DO - 10.1126/science.1138140 ID - Barrangou2007 ER - TY - JOUR AU - Pul, U. AU - Wurm, R. AU - Arslan, Z. AU - Geissen, R. AU - Hofmann, N. AU - Wagner, R. PY - 2010 DA - 2010// TI - Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS JO - Mol Microbiol VL - 75 UR - https://doi.org/10.1111/j.1365-2958.2010.07073.x DO - 10.1111/j.1365-2958.2010.07073.x ID - Pul2010 ER - TY - JOUR AU - Pougach, K. AU - Semenova, E. AU - Bogdanova, E. AU - Datsenko, K. A. AU - Djordjevic, M. AU - Wanner, B. L. AU - Severinov, K. PY - 2010 DA - 2010// TI - Transcription, processing and function of CRISPR cassettes in Escherichia coli JO - Mol Microbiol VL - 77 UR - https://doi.org/10.1111/j.1365-2958.2010.07265.x DO - 10.1111/j.1365-2958.2010.07265.x ID - Pougach2010 ER - TY - JOUR AU - Brouns, S. J. AU - Jore, M. M. AU - Lundgren, M. AU - Westra, E. R. AU - Slijkhuis, R. J. AU - Snijders, A. P. AU - Dickman, M. J. AU - Makarova, K. S. AU - Koonin, E. V. AU - van der Oost, J. PY - 2008 DA - 2008// TI - Small CRISPR RNAs guide antiviral defense in prokaryotes JO - Science VL - 321 UR - https://doi.org/10.1126/science.1159689 DO - 10.1126/science.1159689 ID - Brouns2008 ER - TY - JOUR AU - Al-Attar, S. AU - Westra, E. R. AU - van der Oost, J. AU - Brouns, S. J. PY - 2011 DA - 2011// TI - Clustered regularly interspaced short palindromic repeats (CRISPRs): the hallmark of an ingenious antiviral defense mechanism in prokaryotes JO - Biol Chem VL - 392 UR - https://doi.org/10.1515/bc.2011.042 DO - 10.1515/bc.2011.042 ID - Al-Attar2011 ER - TY - JOUR AU - Diez-Villasenor, C. AU - Almendros, C. AU - Garcia-Martinez, J. AU - Mojica, F. J. PY - 2010 DA - 2010// TI - Diversity of CRISPR loci in Escherichia coli JO - Microbiology VL - 156 UR - https://doi.org/10.1099/mic.0.036046-0 DO - 10.1099/mic.0.036046-0 ID - Diez-Villasenor2010 ER - TY - JOUR AU - Poranen, M. M. AU - Ravantti, J. J. AU - Grahn, A. M. AU - Gupta, R. AU - Auvinen, P. AU - Bamford, D. H. PY - 2006 DA - 2006// TI - Global changes in cellular gene expression during bacteriophage PRD1 infection JO - J Virol VL - 80 UR - https://doi.org/10.1128/JVI.00065-06 DO - 10.1128/JVI.00065-06 ID - Poranen2006 ER - TY - JOUR AU - Westra, E. R. AU - Pul, U. AU - Heidrich, N. AU - Jore, M. M. AU - Lundgren, M. AU - Stratmann, T. AU - Wurm, R. AU - Raine, A. AU - Mescher, M. AU - Van Heereveld, L. PY - 2010 DA - 2010// TI - H-NS-mediated repression of CRISPR-based immunity in Escherichia coli K12 can be relieved by the transcription activator LeuO JO - Mol Microbiol VL - 77 UR - https://doi.org/10.1111/j.1365-2958.2010.07315.x DO - 10.1111/j.1365-2958.2010.07315.x ID - Westra2010 ER - TY - BOOK AU - Sneppen, K. PY - 2005 DA - 2005// TI - GZ: Physics in Molecular Biology PB - Cambridge University Press CY - Cambridge UR - https://doi.org/10.1017/CBO9780511755699 DO - 10.1017/CBO9780511755699 ID - Sneppen2005 ER - TY - JOUR AU - Gillespie, D. T. PY - 2007 DA - 2007// TI - Stochastic simulation of chemical kinetics JO - Annu Rev Phys Chem VL - 58 UR - https://doi.org/10.1146/annurev.physchem.58.032806.104637 DO - 10.1146/annurev.physchem.58.032806.104637 ID - Gillespie2007 ER - TY - JOUR AU - Kruger, D. H. AU - Schroeder, C. PY - 1981 DA - 1981// TI - Bacteriophage T3 and bacteriophage T7 virus-host cell interactions JO - Microbiol Rev VL - 45 ID - Kruger1981 ER - TY - JOUR AU - Semenova, E. AU - Jore, M. M. AU - Datsenko, K. A. AU - Semenova, A. AU - Westra, E. R. AU - Wanner, B. AU - van der Oost, J. AU - Brouns, S. J. AU - Severinov, K. PY - 2011 DA - 2011// TI - Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence JO - Proc Natl Acad Sci U S A VL - 108 UR - https://doi.org/10.1073/pnas.1104144108 DO - 10.1073/pnas.1104144108 ID - Semenova2011 ER - TY - JOUR AU - Semenova, E. AU - Nagornykh, M. AU - Pyatnitskiy, M. AU - Artamonova, I. I. AU - Severinov, K. PY - 2009 DA - 2009// TI - Analysis of CRISPR system function in plant pathogen Xanthomonas oryzae JO - FEMS Microbiol Lett VL - 296 UR - https://doi.org/10.1111/j.1574-6968.2009.01626.x DO - 10.1111/j.1574-6968.2009.01626.x ID - Semenova2009 ER -