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Figure 11 | Biology Direct

Figure 11

From: Domain enhanced lookup time accelerated BLAST

Figure 11

Overview of computing the target frequencies for a PSSM position. Amino acid frequency profiles of conserved domains aligned to the query are added after weighting by the number of independent observations in domain models (shown as numbers next to the arrows). The query sequence is included, with one observation, in all positions where the query residue was not observed in any aligned domain.

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