From: Modeling compositional dynamics based on GC and purine contents of protein-coding sequences
Parameter | Description |
---|---|
A | Adenine content |
T | Thymine content |
G | Guanine content |
C | Cytosine content |
GC | Guanine-plus-cytosine content, GC = G + C |
S | Guanine-plus-cytosine content, S = G + C |
R | Purine (adenine-plus-guanine) content, R = A + G |
A i | Adenine content at codon position i, i = 1, 2, 3 |
T i | Thymine content at codon position i, i = 1, 2, 3 |
G i | Guanine content at codon position i, i = 1, 2, 3 |
C i | Cytosine content at codon position i, i = 1, 2, 3 |
S i | Guanine-plus-cytosine at codon position i, S i = G i + C i , i = 1, 2, 3 |
R i | Purine content at codon position i, R i = A i + G i , i = 1, 2, 3 |