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Table 1 Notation

From: Modeling compositional dynamics based on GC and purine contents of protein-coding sequences

Parameter

Description

A

Adenine content

T

Thymine content

G

Guanine content

C

Cytosine content

GC

Guanine-plus-cytosine content, GC = G + C

S

Guanine-plus-cytosine content, S = G + C

R

Purine (adenine-plus-guanine) content, R = A + G

A i

Adenine content at codon position i, i = 1, 2, 3

T i

Thymine content at codon position i, i = 1, 2, 3

G i

Guanine content at codon position i, i = 1, 2, 3

C i

Cytosine content at codon position i, i = 1, 2, 3

S i

Guanine-plus-cytosine at codon position i, S i = G i + C i , i = 1, 2, 3

R i

Purine content at codon position i, R i = A i + G i , i = 1, 2, 3