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Table 2 The 25 most frequent GO terms associated with the 500 genes richest in spanion clusters in their 6 kb transcript proximal region

From: Relating underrepresented genomic DNA patterns and tiRNAs: the rule behind the observation and beyond

Freq

GO code

GO term

268

GO:0006355

regulation of transcription, DNA-dependent

150

GO:0045449

regulation of transcription

99

GO:0007275

multicellular organismal development

55

GO:0050826

response to freezing

55

GO:0042309

Homoiothermy

49

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

49

GO:0030154

cell differentiation

47

GO:0007186

G-protein coupled receptor protein signaling pathway

46

GO:0007165

signal transduction

45

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

33

GO:0008152

metabolic process

30

GO:0007399

nervous system development

29

GO:0007155

cell adhesion

28

GO:0009887

organ morphogenesis

27

GO:0006468

protein amino acid phosphorylation

26

GO:0007156

homophilic cell adhesion

26

GO:0006412

Translation

24

GO:0006260

DNA replication

23

GO:0007417

central nervous system development

22

GO:0045941

positive regulation of transcription

22

GO:0008284

positive regulation of cell proliferation

22

GO:0007420

brain development

22

GO:0006357

regulation of transcription from RNA polymerase II promoter

21

GO:0007049

cell cycle

20

GO:0016311

Dephosphorylation