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Table 1 Estimated coordinates of the transcription initiation sites of the predicted PEP-promoters

From: Lack of conservation of bacterial type promoters in plastids of Streptophyta

Species

psaA

psbA

psbB

psbE

rbcL

Arabidopsis thaliana

Ex -188

Ex -77

-170

-125

-177

Spinacia oleracea

Ex -179

Ex -82

-175

-150

-176

Cycas taitungensis

Ex -156

-60

Ex -170

-141

-156

Cryptomeria japonica

Ex -142

-58

Ex -142

-137

-161

Pinus koraiensis

Ex -158

-52

-193

-148

-136

Pinus thunbergii

Ex -158

-52

-180

-145

-127

Welwitschia mirabilis

Ex -156

Ex -51

-271

-31

-136

Adiantum capillus-veneris

Ex -163

Ex -55

Ex -291

-191

-157

Angiopteris evecta

Ex -152

Ex -69

Ex -181

-142

-148

Psilotum nudum

Ex -147

Ex -53

Ex -178

-127

-140

Huperzia lucidula

Ex -153

Ex -55

Ex -187

-134

-150

Anthoceros formosae

Ex -155

=

=

-143

-160

Aneura mirabilis

Pseudo

Ex -54

Pseudo

Pseudo

-148

Marchantia polymorpha

Ex -149

Ex -53

=

-132

-124

Physcomitrella patens

Ex -161

Ex -53

=

-145

-143

Chara vulgaris

Ex -199

-121

Ex -179

=

-154

Chaetosphaeridium globosum

Ex -154

Ex -57

Ex -161

-119

-102

Staurastrum punctulatum

Ex -235

Ex -59

-190

-154

-219

Zygnema circumcarinatum

Ex -157

Ex -58

-159

-122

-168

Chlorokybus atmophyticus

=

=

-266

=

=

Mesostigma viride

=

Ex -53

-89

=

=

Bigelowiella natans

=

-136

=

=

=

Cyanophora paradoxa

=

-61

=

=

=

  1. Coordinates are relative to the start codon. The "Ex" means the presence of the 5'-extension TG of the "-10" box, "Pseudo" marks a negative prediction for the pseudogene, "=" - a negative prediction for the functioning gene.