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Figure 1 | Biology Direct

Figure 1

From: Evolution of DNA ligases of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes: a case of hidden complexity

Figure 1

A maximum-likelihood phylogenetic tree of NAD-dependent DNA ligases. The numbers indicate the statistical support (Expected-Likelihood Weights) of internal nodes. The support values are given as percentages (n = 1,000). Archaeal sequences are color-coded red, bacterial sequences green, eukaryotic sequences brown, and viral sequences blue. The NCLDV are shown in bold type. All proteins are denoted by their Genbank identification numbers (GIs). The truncated sequence of the NAD-dependent ligase of Crocodilepox virus was not used for phylogenetic analysis. Abbreviations: MSV, Melanoplus sanguinipes entomopoxvirus; AMV, Amsacta moorei entomopoxvirus; Acapo, Acanthamoeba polyphaga mimivirus; CIV, Chilo iridescent virus (Invertebrate iridescent virus 6); Aedta, Aedes taeniorhynchus iridescent virus (Invertebrate iridescent virus 3); Ralph, Ralstonia solanacearum phage RSL1; Lenar, Lentisphaera araneosa HTCC2155; Acife, Acidithiobacillus ferrooxidans ATCC 23270; Marsp, Marinobacter sp. ELB17; Desal, Desulfatibacillum alkenivorans AK-01; Desac, Desulfuromonas acetoxidans DSM 684; Natph, Natronomonas pharaonis DSM 2160; Halwa, Haloquadratum walsbyi DSM 16790; Ostlu, Ostreococcus lucimarinus CCE9901; Ricfe, Rickettsia felis URRWXCal2; Metin, Methylacidiphilum infernorum V4; Nitsp, Nitratiruptor sp. SB155-2; Aquae, Aquifex aeolicus VF5; CanBl, Candidatus Blochmannia floridanus; Brahy, Brachyspira hyodysenteriae WA1; Lepbu, Leptotrichia buccalis DSM 1135; Dicdi, Dictyostelium discoideum AX4; Borhe, Borrelia hermsii DAH; Bacth, Bacillus thuringiensis Bt407; Cloca, Clostridium carboxidivorans P7; Plepa, Plesiocystis pacifica SIR-1; Sorce, Sorangium cellulosum.

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