Figure 3
From: Pitfalls of the most commonly used models of context dependent substitution
Relationship between dinucleotide MLEs obtained under TF and NF from primate data. Plotted are the mean MLEs for rate parameters obtained under NFnuGTR+Parameter (x-axis) and TFnuGTR+Parameter (y-axis) forms. Means and their standard errors were estimated using the jackknife procedure. Standard errors are not shown as they were smaller than the plotted marker sizes. Coordinates corresponding to the CpG related rate parameters are labelled.