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Table 1 Turmoil-1 elements within the C. elegans genome

From: Transduplication resulted in the incorporation of two protein-coding sequences into the Turmoil-1 transposable element of C. elegans

#

Chr (*)

Start (**)

End (**)

orientation

Containing RRM domain (***)

Containing cpg-3 fragment

Length of the element (****)

1

I

216923

217647

-

+ (1–827)

+

PL

2

I

5979173

5980185

+

+ (1–1177)

+

PL

3

I

5980183

5982782

-

+ (1–2771)

+

PL

4

I

7245338

7245520

+

- (125–317)

+

PL

5

I

13973017

13973196

+

- (4691–4882)

+

PL

6

II

3351574

3356982

-

+ (1–5024)

+

FL

7

II

10883165

10884063

-

- (519–1090)

-

PL

8

II

11452621

11452867

-

+ (323–568)

-

PL

9

IV

2900974

2901153

+

- (125–316)

+

PL

  1. (*) chromosome number
  2. (**) Start and End according to the coordinates of C. elegans genome version ce6 (May 2008).
  3. (***) in brackets the start and end relative to the full sequence of the Turmoil-1 found on chromosome II 3351574 – 3356982 (#6).
  4. (****) PL – partial length of Turmoil-1/FL – full length of Turmoil-1.