From: Splign: algorithms for computing spliced alignments with identification of paralogs
 | 80% | 85% | 90% | 95% | 99% | 99.5% | 99.9% | 100% |
---|---|---|---|---|---|---|---|---|
Splign | 212875 | 209895 | 203460 | 195939 | 182123 | 169058 | 107267 | 76542 |
Sim4 | 212533 | 208571 | 203016 | 195513 | 177784 | 162761 | 97812 | 69359 |
 | -0.16 | -0.61 | -0.20 | -0.19 | -1.98 | -2.88 | -4.32 | -3.29 |
Spidey | 199870 | 195159 | 190753 | 186356 | 172385 | 159021 | 100338 | 72225 |
 | -5.95 | -6.74 | -5.81 | -4.38 | -4.45 | -4.59 | -3.17 | -1.97 |
BLAT | 209899 | 206260 | 201207 | 194640 | 177345 | 163157 | 104338 | 74815 |
 | -1.36 | -1.66 | -1.03 | -0.59 | -2.19 | -2.70 | -1.34 | -0.79 |
GMAP | 208849 | 205793 | 202732 | 196734 | 180048 | 166488 | 105452 | 74975 |
 | -1.84 | -1.88 | -0.33 | +0.36 | -0.95 | -1.18 | -0.83 | -0.72 |
SPA | 203942 | 199548 | 195926 | 192595 | 180273 | 167815 | 105835 | 74911 |
 | -4.09 | -4.73 | -3.45 | -1.53 | -0.85 | -0.57 | -0.65 | -0.75 |