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Table 2 The number of best alignments with A-content of 75% or higher in the 3' exon. The numbers are based on the alignments with the highest overall identity.

From: Splign: algorithms for computing spliced alignments with identification of paralogs

  Sim4 Spidey BLAT GMAP SPA Splign
%% of all mRNAs 15.5 0.57 0.98 0.04 2.12 0.01
%% of RefSeq mRNAs 22.1 0.31 1.67 0.02 2.72 0.00