Table 8 Comparison of GC2/GC3 ratios for different classes of TE-derived and non TE genes (exons). Average GC2/GC3 ratios are compared for pairs of groups indicated using the Students' ttest.
From: Evaluating the protein coding potential of exonized transposable element sequences
Comparison groups | averages | df | t | P |
|---|---|---|---|---|
TE-genes vs non TE-genes | 0.82 vs 0.76 | 14800 | 7.4 | 1.2e-13 |
TE-exons vs non TE-genes | 0.96 vs 0.76 | 14386 | 9.4 | 6.8e-21 |
Alu-exons vs other TE-exons | 1.01 vs 0.95 | 345 | 1.9 | 6.2e-2 |
Alu-exons vs non TE-genes | 1.01 vs 0.76 | 14106 | 8.2 | 3.9e-16 |