Figure 2
From: Evaluating the protein coding potential of exonized transposable element sequences
Relationships among sequence similarity search methods. Colors represent the fraction hits shared between methods, from 0 (white) to 1 (purple). The matrices are symmetrical with self-similarity shown along the diagonal. The search methods are ordered along both axes of the plots with respect to similarity, and dendograms showing the relationships among methods are shown for the PDB (A) and SwissProt (B) data sets.