Skip to main content

Table 3 Genes from the coastal SAR11 strains with homologs in the Sargasso Sea data, but were never found on syntenic fragments.

From: Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data

Gene number Gene product Number of homologs found Occurrences in alternate gene order
SAR11_0079 hypothetical protein ytoq 66 7
SAR11_0171 rhodanese-related sulfurtransferase (ion tranport) 185 3
SAR11_0312* unknown (potential sulfotransferase domain) 343 19
SAR11_0393 sam-dependent methyltransferase 117 42
SAR11_0461 unknown 66 4
SAR11_0642 trypsin-like serine protease 354 5
SAR11_0691 unknown 22 4
SAR11_0796 aldehyde dehydrogenase 1200 16
SAR11_0815 carbonic anhydrase 52 29
SAR11_0845 steroid monooxygenase (ion transport) 307 17
SAR11_0852 homoserine dehydrogenase 102 8
SAR11_0959 unknown 21 5
SAR11_1071 gcn5-related n-acetyltransferase 18 5
SAR11_1144* cyclopropane-fatty-acyl-phospholipid synthase 754 48
SAR11_1227 adp-ribosylglycohydrolase 80 29
SAR11_1248 winged helix dna-binding 160 3
SAR11_1347 Unknown 15 3
  1. * found on just one syntenic fragment, or just a few syntenic fragments with low scores