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Table 1 Nucleotide symbols used: M → (A/C), R → (A/G), W → (A/U), Y → (C/U), S → (C/G), K → (G/U). (Table credit [20])

From: Method of predicting Splice Sites based on signal interactions

Protein High-affinity binding site Functional ESE
SRp20 WCWWC GCUCCUCUUCC
  CUCKUCY CCUCGUCC
SC35 AGSAGAGUA GRYYMCYR
  GWUWCCUGCUA UGCYGYY
  GGGUAUGCUG  
  GAGCAGUAGKS  
  GUUCGAGUA  
  UGUUCSAGWU  
  AGGAGAU  
9G8 (GAC)n  
  ACGAGAGAY  
  WGGACRA  
SF2/ASF RGAAGAAC CRSMSGW
  AGGACRRAGC  
SRp40 UGGGAGCRGUYRGCUCGY YRCRKM
SRp55   YYWCWSG
TRA2β (GAA)n  
nhRNP Al UAGGGW