From: Transcript length bias in RNA-seq data confounds systems biology
Term | Count | Pop Hits | PValue | Benjamini |
---|---|---|---|---|
hsa04610:Complement and coagulation cascades | 60 | 68 | 3.08E-08 | 7.11E-06 |
hsa04910:Insulin signaling pathway | 96 | 133 | 1.06E-04 | 0.0122 |
hsa00020:Citrate cycle (TCA cycle) | 25 | 27 | 2.23E-04 | 0.0170 |
hsa00120:Bile acid biosynthesis | 31 | 36 | 4.23E-04 | 0.0242 |
hsa00071:Fatty acid metabolism | 37 | 45 | 5.35E-04 | 0.0244 |
hsa00980:Metabolism of xenobiotics by cytochrome P450 | 50 | 65 | 7.29E-04 | 0.0277 |
hsa00190:Oxidative phosphorylation | 85 | 121 | 0.001155 | 0.0374 |
hsa00310:Lysine degradation | 38 | 48 | 0.001627 | 0.0459 |
hsa04510:Focal adhesion | 128 | 196 | 0.004824 | 0.0966 |
hsa00051:Fructose and mannose metabolism | 33 | 42 | 0.00463 | 0.102 |
hsa00650:Butanoate metabolism | 35 | 45 | 0.00448 | 0.109 |
hsa04520:Adherens junction | 52 | 74 | 0.0129 | 0.171 |
hsa04810:Regulation of actin cytoskeleton | 133 | 208 | 0.0116 | 0.175 |
hsa04912:GnRH signaling pathway | 64 | 93 | 0.0109 | 0.177 |
hsa00010:Glycolysis/Gluconeogenesis | 43 | 59 | 0.0110 | 0.177 |
hsa00230:Purine metabolism | 94 | 143 | 0.0128 | 0.180 |
hsa00280:Valine, leucine and isoleucine degradation | 33 | 44 | 0.0147 | 0.183 |
hsa05010:Alzheimer's disease | 23 | 29 | 0.0200 | 0.228 |
hsa00620:Pyruvate metabolism | 31 | 42 | 0.0262 | 0.253 |
hsa05210:Colorectal cancer | 57 | 84 | 0.0250 | 0.254 |
hsa00260:Glycine, serine and threonine metabolism | 33 | 45 | 0.0241 | 0.256 |
hsa04514:Cell adhesion molecules (CAMs) | 82 | 126 | 0.0285 | 0.262 |
hsa04670:Leukocyte transendothelial migration | 74 | 113 | 0.0315 | 0.275 |
hsa00220:Urea cycle and metabolism of amino groups | 23 | 30 | 0.0359 | 0.297 |
hsa04360:Axon guidance | 81 | 126 | 0.0429 | 0.313 |
hsa04370:VEGF signaling pathway | 47 | 69 | 0.0401 | 0.315 |
hsa05120:Epithelial cell signaling in Helicobacter pylori infection | 47 | 69 | 0.0401 | 0.315 |
hsa00052:Galactose metabolism | 24 | 32 | 0.0448 | 0.315 |
hsa00480:Glutathione metabolism | 27 | 37 | 0.0495 | 0.315 |
hsa00903:Limonene and pinene degradation | 22 | 29 | 0.0488 | 0.319 |
hsa05040:Huntington's disease | 22 | 29 | 0.0488 | 0.319 |
hsa03320:PPAR signaling pathway | 47 | 70 | 0.0549 | 0.327 |
hsa00380:Tryptophan metabolism | 41 | 60 | 0.0535 | 0.328 |
hsa05211:Renal cell carcinoma | 45 | 67 | 0.0605 | 0.330 |
hsa00591:Linoleic acid metabolism | 23 | 31 | 0.0596 | 0.333 |
hsa01510:Neurodegenerative Diseases | 28 | 39 | 0.0585 | 0.336 |
hsa00410:beta-Alanine metabolism | 19 | 25 | 0.0717 | 0.356 |
hsa00363:Bisphenol A degradation | 12 | 14 | 0.0691 | 0.360 |
hsa00640:Propanoate metabolism | 24 | 33 | 0.0712 | 0.361 |
hsa00860:Porphyrin and chlorophyll metabolism | 27 | 38 | 0.0752 | 0.363 |
hsa00740:Riboflavin metabolism | 13 | 16 | 0.0932 | 0.424 |
sa00770:Pantothenate and CoA biosynthesis | 13 | 16 | 0.0932 | 0.424 |
hsa04530:Tight junction | 81 | 130 | 0.0991 | 0.429 |